GRIMM and MGR

Nov 2024: These pages are from the early 2000s. Links have updated when possible. GRIMM and MGR source code is available to download, but the web versions are no longer available.

Publications on GRIMM and MGR

If you use GRIMM or MGR in your research, please cite the appropriate paper(s) listed below. More publications are in preparation.

GRIMM

Web site: https://mathweb.ucsd.edu/~gptesler/grimm/GRIMM

Papers:

Tesler, G., GRIMM: genome rearrangements web server. Bioinformatics, 18(3), March 2002, 492-493. Paper at journal or author.
Tesler, G., Efficient algorithms for multichromosomal genome rearrangements, Journal of Computer and System Sciences, 65 no. 3 (2002), 587-609.
Abstract and preprint

MGR

Web site: https://mathweb.ucsd.edu/~gptesler/grimm/MGR/

Papers:

Bourque, G. and Pevzner, P. (2002) Genome-Scale Evolution: Reconstructing Gene Orders in the Ancestral Species. Genome Res., 12(1), 26-36. Paper at journal or author.

Our papers using GRIMM or MGR for data analysis

Waterston, et al., Initial sequencing and comparative analysis of the mouse genome, Nature, 420 (2002), 520-562.
(Glenn Tesler and Pavel Pevzner are among the 222 coauthors.)
Paper at journal.
Related material: UCSD press release^*, NIH press release, Nature mouse genome web site, San Diego Union Tribune^* (December 5, 2002; no longer available online).
^* Articles include interviews with Pavel Pevzner and Glenn Tesler.
Pevzner, P. and Tesler, G., Genome Rearrangements in Mammalian Evolution: Lessons from Human and Mouse Genomes, Genome Research, 13 no. 1 (2003), 37-45.
Abstract and preprint

This page was created by Glenn Tesler, University of California, San Diego.